Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BDP_0819Two component system histidine kinase. (845 aa)    
Predicted Functional Partners:
BDP_0818
Two-component response regulator.
 
 
 0.962
BDP_2017
Two-component response regulator.
 
 
 0.823
BDP_1435
Response regulatorof two-component system.
 
 
 0.819
BDP_1605
Two-component response regulator.
 
 
 0.811
BDP_1002
Two-component response regulator.
 
 
 0.808
BDP_0499
Two-component response regulator.
 
 
 0.787
BDP_1949
Two-component response regulator, LuxR family.
 
 
 0.785
pap
Pap Proline iminopeptidase.
       0.635
proC
ProC Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.621
ychF
GTP-binding protein, probable translation factor; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.560
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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