Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene co-occurrence
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Score
BDP_0831Phosphoribulokinase (uridine kinase family protein). (192 aa)    
Predicted Functional Partners:
upp
Uracil phophoribosyl transferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.821
BDP_0832
Conserved hypothetical protein.
 
     0.778
gap
Gap Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.736
BDP_0830
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
       0.639
BDP_1040
Histidine triad (HIT) protein.
   
 0.555
gmk
Gmk Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 0.514
BDP_0904
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.471
pheT
pheT Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.460
purL
purL Phosphoribosylformylglycinamidine synthase.
 
  
 0.438
serA2
serA2 D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
  0.425
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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