Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDP_0044 | BDP_0759 | BDP_0044 | BDP_0759 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.506 |
BDP_0044 | lytR | BDP_0044 | BDP_0883 | Conserved hypothetical protein. | Cell envelope-related transcriptional attenuator. | 0.447 |
BDP_0759 | BDP_0044 | BDP_0759 | BDP_0044 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.506 |
BDP_0759 | BDP_0882 | BDP_0759 | BDP_0882 | Conserved hypothetical protein. | Cell envelope-related transcriptional attenuator. | 0.532 |
BDP_0759 | BDP_0886 | BDP_0759 | BDP_0886 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.672 |
BDP_0759 | BDP_0887 | BDP_0759 | BDP_0887 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.595 |
BDP_0759 | lytR | BDP_0759 | BDP_0883 | Conserved hypothetical protein. | Cell envelope-related transcriptional attenuator. | 0.469 |
BDP_0881 | BDP_0882 | BDP_0881 | BDP_0882 | DNA segregation ATPase-like protein. | Cell envelope-related transcriptional attenuator. | 0.731 |
BDP_0881 | BDP_0886 | BDP_0881 | BDP_0886 | DNA segregation ATPase-like protein. | Conserved hypothetical protein. | 0.632 |
BDP_0881 | BDP_0887 | BDP_0881 | BDP_0887 | DNA segregation ATPase-like protein. | Conserved hypothetical protein. | 0.522 |
BDP_0881 | lytR | BDP_0881 | BDP_0883 | DNA segregation ATPase-like protein. | Cell envelope-related transcriptional attenuator. | 0.571 |
BDP_0881 | whiB | BDP_0881 | BDP_0880 | DNA segregation ATPase-like protein. | WhiB-type transcription regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.721 |
BDP_0881 | whiB-2 | BDP_0881 | BDP_0884 | DNA segregation ATPase-like protein. | WhiB-type transcription regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.422 |
BDP_0882 | BDP_0759 | BDP_0882 | BDP_0759 | Cell envelope-related transcriptional attenuator. | Conserved hypothetical protein. | 0.532 |
BDP_0882 | BDP_0881 | BDP_0882 | BDP_0881 | Cell envelope-related transcriptional attenuator. | DNA segregation ATPase-like protein. | 0.731 |
BDP_0882 | BDP_0886 | BDP_0882 | BDP_0886 | Cell envelope-related transcriptional attenuator. | Conserved hypothetical protein. | 0.515 |
BDP_0882 | BDP_0887 | BDP_0882 | BDP_0887 | Cell envelope-related transcriptional attenuator. | Conserved hypothetical protein. | 0.509 |
BDP_0882 | BDP_1419 | BDP_0882 | BDP_1419 | Cell envelope-related transcriptional attenuator. | Ribosome-associated factor Y. | 0.497 |
BDP_0882 | lytR | BDP_0882 | BDP_0883 | Cell envelope-related transcriptional attenuator. | Cell envelope-related transcriptional attenuator. | 0.905 |
BDP_0882 | whiB | BDP_0882 | BDP_0880 | Cell envelope-related transcriptional attenuator. | WhiB-type transcription regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.627 |
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