STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0920Conserved hypothetical protein. (235 aa)    
Predicted Functional Partners:
BDP_2105
Drug resistance transporter, EmrB/QacA subfamily.
  
     0.762
BDP_0587
Gp26.
  
     0.663
csn1
CRISPR-associated endonuclease Csn1.
  
     0.618
BDP_0063
Conserved hypothetical protein.
  
     0.544
BDP_1717
MutT/nudix family protein.
 
    0.539
BDP_1739
5 nucleotidase deoxy cytosolic type C.
  
     0.527
BDP_2110
Extracellular solute-binding protein, family 1.
  
    0.522
BDP_1379
Transcriptional regulator.
  
     0.488
cas2
CRISPR-associated Cas2.
  
     0.456
BDP_2252
Conserved hypothetical protein.
  
     0.453
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.