STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglBeta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (391 aa)    
Predicted Functional Partners:
BDP_2127
Cellobiose phosphorylase.
    
 0.911
BDP_0951
ABC transporter sugar permease.
  
  
 0.802
BDP_0952
Extracellular solute-binding protein.
  
  
 0.801
BDP_0950
Beta-glucosidase.
     
 0.781
BDP_0124
Beta-glucosidase.
  
  
 
0.741
BDP_0111
Oligo-1,6-glucosidase.
  
 
 0.680
agl2
Agl2 Alpha-glucosidase.
  
 
 0.680
agl3
Agl3 Alpha-glucosidase.
  
 
 0.680
agl2-2
Agl2 Alpha-glucosidase.
  
 
 0.680
fosC
FosC Beta-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.677
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.