STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_0995Conserved hypothetical protein. (389 aa)    
Predicted Functional Partners:
BDP_0356
Conserved hypothetical membrane spanning protein.
  
     0.771
BDP_1331
Narrowly conserved hypothetical protein.
  
     0.767
BDP_1589
Chromosome segregation ATPase.
  
     0.763
BDP_0266
Conserved hypothetical protein.
  
     0.754
BDP_1208
Hypothetical secreted protein.
  
     0.753
BDP_0169
Putative lipoprotein.
  
     0.745
BDP_1332
Narrowly conserved hypothetical membrane spanning protein.
  
     0.738
BDP_0886
Conserved hypothetical protein.
  
     0.737
BDP_1625
Aminoglycoside phosphotransferase.
 
     0.733
BDP_0233
Conserved hypothetical protein.
  
     0.730
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.