Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BDP_0499 | BDP_1002 | Two-component response regulator. | Two-component response regulator. | 0.773 |
BDP_0499 | BDP_1003 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.599 |
BDP_0499 | BDP_1605 | Two-component response regulator. | Two-component response regulator. | 0.752 |
BDP_0499 | BDP_1949 | Two-component response regulator. | Two-component response regulator, LuxR family. | 0.764 |
BDP_0499 | BDP_2017 | Two-component response regulator. | Two-component response regulator. | 0.771 |
BDP_0818 | BDP_1003 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.651 |
BDP_0818 | BDP_1949 | Two-component response regulator. | Two-component response regulator, LuxR family. | 0.759 |
BDP_0999 | BDP_1000 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.950 |
BDP_0999 | BDP_1003 | Conserved hypothetical protein. | Two-component sensor histidine kinase. | 0.568 |
BDP_0999 | BDP_1004 | Conserved hypothetical protein. | Hypothetical protein. | 0.657 |
BDP_1000 | BDP_0999 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.950 |
BDP_1000 | BDP_1003 | Conserved hypothetical protein. | Two-component sensor histidine kinase. | 0.671 |
BDP_1000 | BDP_1004 | Conserved hypothetical protein. | Hypothetical protein. | 0.771 |
BDP_1002 | BDP_0499 | Two-component response regulator. | Two-component response regulator. | 0.773 |
BDP_1002 | BDP_1003 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.957 |
BDP_1002 | BDP_1004 | Two-component response regulator. | Hypothetical protein. | 0.884 |
BDP_1002 | BDP_1605 | Two-component response regulator. | Two-component response regulator. | 0.753 |
BDP_1002 | BDP_1949 | Two-component response regulator. | Two-component response regulator, LuxR family. | 0.760 |
BDP_1002 | BDP_2017 | Two-component response regulator. | Two-component response regulator. | 0.773 |
BDP_1003 | BDP_0499 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.599 |
page 1 of 3