Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BDP_0037 | BDP_1133 | BDP_0037 | BDP_1133 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Shikimate 5-dehydrogenase. | 0.584 |
| BDP_0037 | aroA | BDP_0037 | BDP_0996 | Para-aminobenzoate synthase glutamine amidotransferase component II. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.416 |
| BDP_0037 | aroB | BDP_0037 | BDP_1026 | Para-aminobenzoate synthase glutamine amidotransferase component II. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | 0.787 |
| BDP_0037 | aroC | BDP_0037 | BDP_1025 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.897 |
| BDP_0037 | pheA | BDP_0037 | BDP_1499 | Para-aminobenzoate synthase glutamine amidotransferase component II. | pheA Prephenate dehydratase. | 0.877 |
| BDP_0037 | trpA | BDP_0037 | BDP_1191 | Para-aminobenzoate synthase glutamine amidotransferase component II. | TrpA Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.946 |
| BDP_0037 | trpE | BDP_0037 | BDP_1193 | Para-aminobenzoate synthase glutamine amidotransferase component II. | trpE Anthranilate synthase component I. | 0.999 |
| BDP_0037 | tyrA | BDP_0037 | BDP_1979 | Para-aminobenzoate synthase glutamine amidotransferase component II. | Chorismate mutase TyrA. | 0.856 |
| BDP_1133 | BDP_0037 | BDP_1133 | BDP_0037 | Shikimate 5-dehydrogenase. | Para-aminobenzoate synthase glutamine amidotransferase component II. | 0.584 |
| BDP_1133 | aroA | BDP_1133 | BDP_0996 | Shikimate 5-dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.935 |
| BDP_1133 | aroB | BDP_1133 | BDP_1026 | Shikimate 5-dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | 0.987 |
| BDP_1133 | aroC | BDP_1133 | BDP_1025 | Shikimate 5-dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.926 |
| BDP_1133 | aroQ | BDP_1133 | BDP_1027 | Shikimate 5-dehydrogenase. | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.971 |
| BDP_1133 | pheA | BDP_1133 | BDP_1499 | Shikimate 5-dehydrogenase. | pheA Prephenate dehydratase. | 0.614 |
| BDP_1133 | trpA | BDP_1133 | BDP_1191 | Shikimate 5-dehydrogenase. | TrpA Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.499 |
| BDP_1133 | trpE | BDP_1133 | BDP_1193 | Shikimate 5-dehydrogenase. | trpE Anthranilate synthase component I. | 0.519 |
| BDP_1133 | tyrA | BDP_1133 | BDP_1979 | Shikimate 5-dehydrogenase. | Chorismate mutase TyrA. | 0.438 |
| aroA | BDP_0037 | BDP_0996 | BDP_0037 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Para-aminobenzoate synthase glutamine amidotransferase component II. | 0.416 |
| aroA | BDP_1133 | BDP_0996 | BDP_1133 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Shikimate 5-dehydrogenase. | 0.935 |
| aroA | aroB | BDP_0996 | BDP_1026 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | 0.999 |
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