ybeY protein (Bifidobacterium dentium) - STRING interaction network

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ybeY

Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (181 aa)

Predicted Functional Partners:

BDP_1042

0.984

era

0.940

BDP_1044

0.935

BDP_1040

0.753

rplU

0.749

rplQ

0.704

rpsQ

0.698

rplO

0.692

rplK

0.690

rplM

0.690

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP_1040	BDP_1042	BDP_1040	BDP_1042	Histidine triad (HIT) protein.	PhoH-like protein.	0.734
BDP_1040	BDP_1044	BDP_1040	BDP_1044	Histidine triad (HIT) protein.	Hemolysins-like protein containing CBS domains.	0.682
BDP_1040	era	BDP_1040	BDP_1045	Histidine triad (HIT) protein.	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.704
BDP_1040	ybeY	BDP_1040	BDP_1043	Histidine triad (HIT) protein.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.753
BDP_1042	BDP_1040	BDP_1042	BDP_1040	PhoH-like protein.	Histidine triad (HIT) protein.	0.734
BDP_1042	BDP_1044	BDP_1042	BDP_1044	PhoH-like protein.	Hemolysins-like protein containing CBS domains.	0.890
BDP_1042	era	BDP_1042	BDP_1045	PhoH-like protein.	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.843
BDP_1042	ybeY	BDP_1042	BDP_1043	PhoH-like protein.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.984
BDP_1044	BDP_1040	BDP_1044	BDP_1040	Hemolysins-like protein containing CBS domains.	Histidine triad (HIT) protein.	0.682
BDP_1044	BDP_1042	BDP_1044	BDP_1042	Hemolysins-like protein containing CBS domains.	PhoH-like protein.	0.890
BDP_1044	era	BDP_1044	BDP_1045	Hemolysins-like protein containing CBS domains.	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.941
BDP_1044	ybeY	BDP_1044	BDP_1043	Hemolysins-like protein containing CBS domains.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.935
era	BDP_1040	BDP_1045	BDP_1040	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Histidine triad (HIT) protein.	0.704
era	BDP_1042	BDP_1045	BDP_1042	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	PhoH-like protein.	0.843
era	BDP_1044	BDP_1045	BDP_1044	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Hemolysins-like protein containing CBS domains.	0.941
era	ybeY	BDP_1045	BDP_1043	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.940
rplK	rplM	BDP_0353	BDP_0419	rplK LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	rplM 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.992
rplK	rplO	BDP_0353	BDP_0450	rplK LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	rplO 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.991
rplK	rplQ	BDP_0353	BDP_0458	rplK LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	rplQ 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.992
rplK	rplU	BDP_0353	BDP_0345	rplK LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	rplU LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990

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