STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_1275Haloacid dehalogenase-like hydrolase (HAD superfamily). (225 aa)    
Predicted Functional Partners:
recN
DNA repair protein recN; May be involved in recombinational repair of damaged DNA.
       0.732
nadK
NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.732
thiD
ThiD Phosphomethylpyrimidine kinase/Hydroxymethylpyrimidine kinase.
      0.713
BDP_1278
Trk-type K+ transport systems, membrane protein.
       0.617
BDP_1279
K+ transport systems, NAD-binding component.
     
 0.577
ptsG
ptsG PTS system, glucose-specific IIABC component.
  
  
 0.456
BDP_1930
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1(PTS system).
  
  
 0.456
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.