STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glnA1glnA1 Glutamine synthetase. (478 aa)    
Predicted Functional Partners:
BDP_1078
Glutamate synthase [NADPH] large subunit.
  
 
 0.972
gadB
GadB glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.964
BDP_0008
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.948
BDP_1079
Glutamate synthase [NADPH] small subunit.
  
 
 0.938
BDP_0650
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
  
 
 0.934
carB
carB Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 0.925
glnA2
glnA2 Glutamine synthetase.
 
  
0.921
carA
carA Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
  
 
 0.914
purF
purF Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 
 0.911
pdhD
pdhD Dihydrolipoamide dehydrogenase.
  
 
 0.907
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.