Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BDP_1343Aminopeptidase C; Belongs to the peptidase C1 family. (520 aa)    
Predicted Functional Partners:
pepC2
pepC2 Aminopeptidase C; Belongs to the peptidase C1 family.
  
  
 
0.918
magZ
MazG-like conserved hypothetical protein.
       0.723
BDP_1342
Helicase.
       0.672
BDP_1345
Conserved hypothetical secreted protein.
       0.551
BDP_0993
Phosphohydrolase (MutT/nudix family protein); Belongs to the Nudix hydrolase family.
    
   0.409
BDP_1810
Phosphohydrolase (MutT/nudix family protein).
    
   0.409
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.