STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adh3-2Adh3 Alcohol dehydrogenase. (265 aa)    
Predicted Functional Partners:
adh2
Adh2 Aldehyde-alcohol dehydrogenase 2; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.976
adh
Alcohol dehydrogenase.
 
 0.970
BDP_1067
Amino acid permease.
  
 
 0.714
fucO
fucO Lactaldehyde reductase.
  
 
 0.617
adh2-2
Adh2 Aldehyde-alcohol dehydrogenase 2.
  
 
 0.617
adh3
Adh3 Alcohol dehydrogenase.
 
  
 0.536
fabG-3
fabG 3-oxoacyl-[acyl-carrier protein] reductase.
 
 
 0.527
BDP_1354
Amino acid permease.
  
 
 0.521
leuC
leuC 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
 
 0.518
pfl
Pfl Formate acetyltransferase.
  
  
 0.508
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.