STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgsA2-2pgsA2 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (219 aa)    
Predicted Functional Partners:
pgsA2
PgsA2 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
     
 0.957
cdsA
CdsA Phosphatidate cytidylyltransferase.
 
  
 0.951
BDP_1186
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
0.932
cinA
Competence-damage protein cinA; Belongs to the CinA family.
  
  
 0.876
ftsK-2
Cell division protein ftsK.
  
  
 0.798
BDP_1423
Transcriptional regulator.
       0.712
BDP_1422
Conserved hypothetical protein.
       0.616
fic-2
Cell filamentation protein fic.
       0.534
gpsA
gpsA Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   
 0.512
recX
recX RecX-like protein; Modulates RecA activity; Belongs to the RecX family.
       0.450
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.