Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fic-2Cell filamentation protein fic. (235 aa)    
Predicted Functional Partners:
BDP_0144
Fimbrial subunit.
  
     0.695
BDP_0977
Conserved hypothetical protein.
 
     0.630
BDP_1170
Conserved hypothetical protein.
  
     0.621
crcB
crcB-like protein, campher resistance; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
  
     0.609
BDP_2085
Glutamine amidotransferase, class-II.
  
     0.596
BDP_1779
FHA domain-containing protein.
  
     0.577
BDP_1434
Conserved hypothetical protein.
 
     0.575
BDP_1331
Narrowly conserved hypothetical protein.
  
     0.557
BDP_1615
Hydrolases of the alpha/beta superfamily.
  
     0.538
ftsK-2
Cell division protein ftsK.
       0.519
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.