BDP_1440 protein (Bifidobacterium dentium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

BDP_1440

ABC-2 type transporter. (404 aa)

Predicted Functional Partners:

BDP_1438

0.960

BDP_1439

0.938

BDP_1436

0.856

BDP_1435

0.753

BDP_0195

0.683

BDP_0081

0.490

BDP_1841

0.490

BDP_2216

0.490

BDP_0178

0.448

pip1

0.426

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP_0081	BDP_1439	BDP_0081	BDP_1439	Nitroreductase family protein.	ABC-type multidrug transport system permease.	0.490
BDP_0081	BDP_1440	BDP_0081	BDP_1440	Nitroreductase family protein.	ABC-2 type transporter.	0.490
BDP_0178	BDP_1439	BDP_0178	BDP_1439	Phage-infection protein-like hypothetical membrane-spanning protein.	ABC-type multidrug transport system permease.	0.427
BDP_0178	BDP_1440	BDP_0178	BDP_1440	Phage-infection protein-like hypothetical membrane-spanning protein.	ABC-2 type transporter.	0.448
BDP_0195	BDP_1438	BDP_0195	BDP_1438	Conserved hypothetical protein.	ATP-binding protein of ABC transporter system.	0.488
BDP_0195	BDP_1439	BDP_0195	BDP_1439	Conserved hypothetical protein.	ABC-type multidrug transport system permease.	0.667
BDP_0195	BDP_1440	BDP_0195	BDP_1440	Conserved hypothetical protein.	ABC-2 type transporter.	0.683
BDP_1435	BDP_1436	BDP_1435	BDP_1436	Response regulatorof two-component system.	Histidine kinase sensor of two-component system.	0.979
BDP_1435	BDP_1438	BDP_1435	BDP_1438	Response regulatorof two-component system.	ATP-binding protein of ABC transporter system.	0.853
BDP_1435	BDP_1439	BDP_1435	BDP_1439	Response regulatorof two-component system.	ABC-type multidrug transport system permease.	0.804
BDP_1435	BDP_1440	BDP_1435	BDP_1440	Response regulatorof two-component system.	ABC-2 type transporter.	0.753
BDP_1436	BDP_1435	BDP_1436	BDP_1435	Histidine kinase sensor of two-component system.	Response regulatorof two-component system.	0.979
BDP_1436	BDP_1438	BDP_1436	BDP_1438	Histidine kinase sensor of two-component system.	ATP-binding protein of ABC transporter system.	0.902
BDP_1436	BDP_1439	BDP_1436	BDP_1439	Histidine kinase sensor of two-component system.	ABC-type multidrug transport system permease.	0.897
BDP_1436	BDP_1440	BDP_1436	BDP_1440	Histidine kinase sensor of two-component system.	ABC-2 type transporter.	0.856
BDP_1438	BDP_0195	BDP_1438	BDP_0195	ATP-binding protein of ABC transporter system.	Conserved hypothetical protein.	0.488
BDP_1438	BDP_1435	BDP_1438	BDP_1435	ATP-binding protein of ABC transporter system.	Response regulatorof two-component system.	0.853
BDP_1438	BDP_1436	BDP_1438	BDP_1436	ATP-binding protein of ABC transporter system.	Histidine kinase sensor of two-component system.	0.902
BDP_1438	BDP_1439	BDP_1438	BDP_1439	ATP-binding protein of ABC transporter system.	ABC-type multidrug transport system permease.	0.978
BDP_1438	BDP_1440	BDP_1438	BDP_1440	ATP-binding protein of ABC transporter system.	ABC-2 type transporter.	0.960