STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_14733-hydroxy-3-methylglutaryl CoA synthase. (285 aa)    
Predicted Functional Partners:
BDP_1472
Phage tail protein.
  
    0.805
BDP_1474
Phage minor structural protein.
  
    0.805
BDP_1475
Structural phage protein.
       0.762
BDP_1476
Hypothetical protein.
       0.756
BDP_0179
Possible adhesin.
  
   0.685
BDP_1471
Hypothetical protein.
       0.618
BDP_1477
Phage lysin-like lysozyme M1.
       0.558
BDP_1469
Phage major tail protein.
   
   0.543
BDP_0122
Sialic acidspecific 9-O-acetylesterase.
  
   0.455
BDP_0123
Acetyl esterase.
  
   0.455
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.