STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_1534Fructokinase. (299 aa)    
Predicted Functional Partners:
rpe
Ribulose-phosphate 3-epimerase.
  
 0.933
fosC
FosC Beta-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.931
BDP_2170
Sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.925
gpi
Gpi Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.914
BDP_0650
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
  
 0.911
BDP_0521
Mannose-6-phosphate isomerase.
    
 0.908
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.907
BDP_0111
Oligo-1,6-glucosidase.
    
 0.905
agl2
Agl2 Alpha-glucosidase.
    
 0.905
agl3
Agl3 Alpha-glucosidase.
    
 0.905
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.