Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ldh2Ldh2 L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (320 aa)    
Predicted Functional Partners:
BDP_0904
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.983
BDP_1119
Malate dehydrogenase.
  
 0.974
gpi
Gpi Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.958
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 0.948
tkt
Transketolase; Belongs to the transketolase family.
  
 0.943
BDP_1143
Aminotransferase.
  
 0.940
gltA
gltA Citrate synthase; Belongs to the citrate synthase family.
  
 0.930
BDP_0294
Aminotransferase.
  
 0.928
aspC
aspC Aspartate aminotransferase.
  
 0.925
BDP_1006
Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase.
    
 0.924
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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