STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_1577Serine protease. (845 aa)    
Predicted Functional Partners:
BDP_1576
CD9/CD37/CD63 antigen.
 
 
 0.946
BDP_1565
DNA segregation ATPase and related proteins (FtsK/SpoIIIE family).
 
 
 0.856
glnD-2
glnD [protein-PII] uridylyltransferase; Belongs to the WXG100 family.
 
 
 0.773
BDP_1572
Serine protease.
 
 
0.690
BDP_0881
DNA segregation ATPase-like protein.
  
 
 0.590
BDP_0773
Conserved hypothetical protein; Belongs to the WXG100 family.
  
 
 0.502
BDP_1575
Conserved hypothetical protein; Belongs to the WXG100 family.
  
 
 0.502
BDP_1678
Glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
   0.479
BDP_1401
Putative DNA binding protein.
  
 
 0.476
BDP_1679
Glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
   0.475
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.