Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BDP_1615Hydrolases of the alpha/beta superfamily. (567 aa)    
Predicted Functional Partners:
BDP_1618
Pyridoxine biosynthesis enzyme.
 
     0.774
ispG
IspG 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.773
BDP_1779
FHA domain-containing protein.
  
     0.766
BDP_1778
Hypothetical protein.
  
     0.756
BDP_1580
Conserved hypothetical protein.
  
     0.754
BDP_0144
Fimbrial subunit.
  
     0.733
crcB
crcB-like protein, campher resistance; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
  
     0.720
BDP_1938
Conserved hypothetical protein.
  
     0.719
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.710
BDP_0340
ATP-binding protein of ABC transporter system.
  
     0.707
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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