cas3 protein (Bifidobacterium dentium) - STRING interaction network

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Score

cas3

CRISPR-associated helicase Cas3. (847 aa)

Predicted Functional Partners:

cds1

0.921

cas5

0.921

cas1-2

0.832

BDP_1644

0.457

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP_1644	cas3	BDP_1644	BDP_1643	ATPase.	CRISPR-associated helicase Cas3.	0.457
cas1-2	cas3	BDP_1640	BDP_1643	CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	CRISPR-associated helicase Cas3.	0.832
cas1-2	cas5	BDP_1640	BDP_1642	CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	CRISPR-associated Cas5 family protein.	0.806
cas1-2	cds1	BDP_1640	BDP_1641	CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	CRISPR-associated RAMP Csd1 family protein.	0.787
cas3	BDP_1644	BDP_1643	BDP_1644	CRISPR-associated helicase Cas3.	ATPase.	0.457
cas3	cas1-2	BDP_1643	BDP_1640	CRISPR-associated helicase Cas3.	CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.832
cas3	cas5	BDP_1643	BDP_1642	CRISPR-associated helicase Cas3.	CRISPR-associated Cas5 family protein.	0.921
cas3	cds1	BDP_1643	BDP_1641	CRISPR-associated helicase Cas3.	CRISPR-associated RAMP Csd1 family protein.	0.921
cas5	cas1-2	BDP_1642	BDP_1640	CRISPR-associated Cas5 family protein.	CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.806
cas5	cas3	BDP_1642	BDP_1643	CRISPR-associated Cas5 family protein.	CRISPR-associated helicase Cas3.	0.921
cas5	cds1	BDP_1642	BDP_1641	CRISPR-associated Cas5 family protein.	CRISPR-associated RAMP Csd1 family protein.	0.990
cds1	cas1-2	BDP_1641	BDP_1640	CRISPR-associated RAMP Csd1 family protein.	CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.787
cds1	cas3	BDP_1641	BDP_1643	CRISPR-associated RAMP Csd1 family protein.	CRISPR-associated helicase Cas3.	0.921
cds1	cas5	BDP_1641	BDP_1642	CRISPR-associated RAMP Csd1 family protein.	CRISPR-associated Cas5 family protein.	0.990