Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDP_1648 | BDP_1965 | BDP_1648 | BDP_1965 | Transcriptional regulator, LacI family. | Auxin efflux carrier-like permease. | 0.553 |
BDP_1648 | lacS | BDP_1648 | BDP_1646 | Transcriptional regulator, LacI family. | LacS Galactoside symporter. | 0.730 |
BDP_1930 | lacS | BDP_1930 | BDP_1646 | Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1(PTS system). | LacS Galactoside symporter. | 0.786 |
BDP_1965 | BDP_1648 | BDP_1965 | BDP_1648 | Auxin efflux carrier-like permease. | Transcriptional regulator, LacI family. | 0.553 |
BDP_1965 | lacS | BDP_1965 | BDP_1646 | Auxin efflux carrier-like permease. | LacS Galactoside symporter. | 0.461 |
lacS | BDP_1648 | BDP_1646 | BDP_1648 | LacS Galactoside symporter. | Transcriptional regulator, LacI family. | 0.730 |
lacS | BDP_1930 | BDP_1646 | BDP_1930 | LacS Galactoside symporter. | Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1(PTS system). | 0.786 |
lacS | BDP_1965 | BDP_1646 | BDP_1965 | LacS Galactoside symporter. | Auxin efflux carrier-like permease. | 0.461 |
lacS | lacZ1 | BDP_1646 | BDP_1647 | LacS Galactoside symporter. | LacZ1 Beta-galactosidase. | 0.702 |
lacZ1 | lacS | BDP_1647 | BDP_1646 | LacZ1 Beta-galactosidase. | LacS Galactoside symporter. | 0.702 |