nmrA protein (Bifidobacterium dentium) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

nmrA

NmrA-like protein. (313 aa)

Predicted Functional Partners:

pldB

0.681

BDP_2115

0.664

BDP_1316

0.633

BDP_2129

0.558

atpG

0.544

sdhB

0.535

dnaJ

0.522

dnaJ1

0.522

BDP_0338

0.489

bbgIII

0.449

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP_0338	BDP_1316	BDP_0338	BDP_1316	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	Lipase.	0.423
BDP_0338	BDP_2115	BDP_0338	BDP_2115	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	Lipase.	0.423
BDP_0338	BDP_2129	BDP_0338	BDP_2129	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	Xylan esterase.	0.423
BDP_0338	dnaJ	BDP_0338	BDP_1147	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]	0.523
BDP_0338	dnaJ1	BDP_0338	BDP_2178	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	Chaperone protein DnaJ.	0.523
BDP_0338	nmrA	BDP_0338	BDP_1700	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	NmrA-like protein.	0.489
BDP_1316	BDP_0338	BDP_1316	BDP_0338	Lipase.	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.423
BDP_1316	nmrA	BDP_1316	BDP_1700	Lipase.	NmrA-like protein.	0.633
BDP_2115	BDP_0338	BDP_2115	BDP_0338	Lipase.	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.423
BDP_2115	nmrA	BDP_2115	BDP_1700	Lipase.	NmrA-like protein.	0.664
BDP_2129	BDP_0338	BDP_2129	BDP_0338	Xylan esterase.	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.423
BDP_2129	nmrA	BDP_2129	BDP_1700	Xylan esterase.	NmrA-like protein.	0.558
atpG	nmrA	BDP_1954	BDP_1700	ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.	NmrA-like protein.	0.544
atpG	sdhB	BDP_1954	BDP_0803	ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.	SdhB Succinate dehydrogenase iron-sulfur protein.	0.777
bbgIII	nmrA	BDP_1701	BDP_1700	Beta-galactosidase BbgIII.	NmrA-like protein.	0.449
dnaJ	BDP_0338	BDP_1147	BDP_0338	Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.523
dnaJ	nmrA	BDP_1147	BDP_1700	Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]	NmrA-like protein.	0.522
dnaJ1	BDP_0338	BDP_2178	BDP_0338	Chaperone protein DnaJ.	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.523
dnaJ1	nmrA	BDP_2178	BDP_1700	Chaperone protein DnaJ.	NmrA-like protein.	0.522
nmrA	BDP_0338	BDP_1700	BDP_0338	NmrA-like protein.	Putative ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.489