STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bbgIIIBeta-galactosidase BbgIII. (1906 aa)    
Predicted Functional Partners:
BDP_1706
Solute-binding protein of ABC transporter system for sugars.
 
     0.808
BDP_0029
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.681
BDP_1705
Permease protein of ABC transporter system for sugars.
 
     0.595
BDP_1703
Conserved hypothetical protein.
 
   
 0.575
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.573
BDP_0503
Narrowly conserved hypothetical membrane spanning protein.
  
   
 0.561
pgm
Pgm Phosphoglucomutase.
   
  
 0.491
BDP_2094
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 43 family.
 
     0.477
BDP_2161
Solute binding protein of ABC transporter system for sugars.
 
     0.472
BDP_1704
Sugar-binding protein of ABC transporter system, permease.
 
     0.459
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.