STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_1703Conserved hypothetical protein. (586 aa)    
Predicted Functional Partners:
BDP_1702
Hypothetical protein.
       0.773
BDP_0658
alpha-L-arabinofuranosidase.
 
   
 0.693
bbgIII
Beta-galactosidase BbgIII.
 
   
 0.575
BDP_1704
Sugar-binding protein of ABC transporter system, permease.
 
     0.571
BDP_1668
alpha-L-rhamnosidase domain protein.
 
    0.555
BDP_2152
Alpha-L-fucosidase.
 
     0.552
BDP_1705
Permease protein of ABC transporter system for sugars.
 
     0.548
BDP_1706
Solute-binding protein of ABC transporter system for sugars.
 
     0.535
BDP_2092
Alpha-galactosidase.
 
     0.410
BDP_0568
Beta-1,4-xylosidase; Belongs to the glycosyl hydrolase 43 family.
     
 0.404
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.