Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BDP_1419 | rnj | BDP_1419 | BDP_1754 | Ribosome-associated factor Y. | Beta-lactamase domain-containing protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.537 |
| dapA | pepN | BDP_1756 | BDP_1753 | DapA dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | PepN aminopeptidase N. | 0.556 |
| dapA | rnj | BDP_1756 | BDP_1754 | DapA dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Beta-lactamase domain-containing protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.707 |
| glmM | pepN | BDP_1752 | BDP_1753 | GlmM phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | PepN aminopeptidase N. | 0.713 |
| glmM | rnj | BDP_1752 | BDP_1754 | GlmM phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | Beta-lactamase domain-containing protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.576 |
| idsA | rnj | BDP_1413 | BDP_1754 | idsA Polyprenyl synthase; Belongs to the FPP/GGPP synthase family. | Beta-lactamase domain-containing protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.681 |
| jag | rne | BDP_2275 | BDP_0344 | Jag protein. | Rne Ribonuclease G. | 0.640 |
| jag | rnj | BDP_2275 | BDP_1754 | Jag protein. | Beta-lactamase domain-containing protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.515 |
| orn | pnp | BDP_0626 | BDP_0367 | Orn Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.463 |
| orn | rne | BDP_0626 | BDP_0344 | Orn Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | Rne Ribonuclease G. | 0.438 |
| orn | rnj | BDP_0626 | BDP_1754 | Orn Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | Beta-lactamase domain-containing protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.659 |
| pepN | dapA | BDP_1753 | BDP_1756 | PepN aminopeptidase N. | DapA dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.556 |
| pepN | glmM | BDP_1753 | BDP_1752 | PepN aminopeptidase N. | GlmM phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.713 |
| pepN | rnj | BDP_1753 | BDP_1754 | PepN aminopeptidase N. | Beta-lactamase domain-containing protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.687 |
| pnp | orn | BDP_0367 | BDP_0626 | Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Orn Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.463 |
| pnp | rne | BDP_0367 | BDP_0344 | Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Rne Ribonuclease G. | 0.995 |
| pnp | rnj | BDP_0367 | BDP_1754 | Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Beta-lactamase domain-containing protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.729 |
| pnp | ybeY | BDP_0367 | BDP_1043 | Pnp Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.671 |
| rne | jag | BDP_0344 | BDP_2275 | Rne Ribonuclease G. | Jag protein. | 0.640 |
| rne | orn | BDP_0344 | BDP_0626 | Rne Ribonuclease G. | Orn Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.438 |
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