STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galTGalT galactose-1-phosphate uridylyltransferase. (416 aa)    
Predicted Functional Partners:
galK
GalK galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.999
galE
galE UDP-glucose 4-epimerase.
 
 0.989
BDP_1163
UTP-glucose-1-phosphate uridylyltransferase.
    
 0.967
BDP_0246
UDP-glactopyranose mutase.
    
  0.903
BDP_1796
Transcriptional regulator, DeoR family.
 
   
 0.861
BDP_2033
Nucleotide sugar dehydrogenase.
    
 0.829
BDP_1518
Aldose 1-epimerase.
 
 
 0.656
pgm
Pgm Phosphoglucomutase.
     
 0.545
rmlB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
   
  
 0.506
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.