Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BDP_1816Low molecular weight protein-tyrosine-phosphatase. (652 aa)    
Predicted Functional Partners:
ptpA
ptpA Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
     0.765
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.588
BDP_1859
Chain length regulator (capsular polysaccharide biosynthesis) / Tyrosine-protein kinase.
 
 
 0.587
BDP_1854
Chain length regulator (capsular polysaccharide biosynthesis) / Tyrosine-protein kinase.
 
 
 0.561
cspD
Undecaprenyl-phosphate galactose phosphotransferase CspD.
 
  
 0.462
BDP_1814
Conserved hypothetical secreted protein with G5 domain.
       0.449
BDP_1936
Thioredoxin domain-containing protein.
  
 
 0.449
fosC
FosC Beta-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.433
BDP_2170
Sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.433
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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