STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsFEpsF glycosyl transferase (group 1). (384 aa)    
Predicted Functional Partners:
BDP_1846
Glycosyl transferase group 1.
  
     0.767
BDP_2032
Glycosyl transferase group 1.
  
     0.691
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.541
BDP_1071
Alpha/beta hydrolase.
   
 
 0.534
rfbP
RfbP Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.507
cspD-2
Undecaprenyl-phosphate sugar phosphotransferase CspD.
 
  
 0.503
BDP_1818
Hypothetical protein.
       0.501
BDP_1817
Conserved hypothetical protein.
  
  
 0.481
cspD
Undecaprenyl-phosphate galactose phosphotransferase CspD.
  
  
 0.466
wzx-3
Flippase Wzx.
 
  
 0.457
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.