Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BDP_1829Hypothetical transmembrane protein possibly involved in polysaccharide biosynthesis. (509 aa)    
Predicted Functional Partners:
cspD
Undecaprenyl-phosphate galactose phosphotransferase CspD.
  
  
 0.715
BDP_1828
Conserved hypothetical protein.
       0.714
rmlB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.604
BDP_2033
Nucleotide sugar dehydrogenase.
  
  
 0.604
BDP_0246
UDP-glactopyranose mutase.
  
  
 0.597
BDP_1825
Acetyltransferase.
  
  
 0.557
BDP_1830
Acyltransferase 3.
       0.541
BDP_1831
Conserved hypothetical protein.
       0.541
BDP_1827
Conserved hypothetical protein.
       0.518
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.499
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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