Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BDP_1848Glycosyl transferase, family 2. (329 aa)    
Predicted Functional Partners:
BDP_1849
Glycosyl transferase, family 2.
 
    
0.830
wefN
Glycosyl transferase group 1 WefN.
 
 
 0.818
BDP_1852
Glycosyl transferases group 1,glycosyl transferase group 1.
 
 
 0.799
BDP_1847
Capsular polysaccharide biosynthsis protein.
  
 
 0.791
BDP_1851
Conserved hypothetical protein.
       0.773
BDP_1853
Acetyltransferase.
  
    0.756
BDP_1843
Glycosyl transferase family 2.
 
    
0.734
BDP_1844
Glycosyl transferase, family 2.
 
    
0.731
BDP_1839
Glycosyl transferase, family 2.
 
    
0.714
BDP_1842
Polysaccharide pyruvyl transferase.
 
     0.699
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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