STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_1852Glycosyl transferases group 1,glycosyl transferase group 1. (385 aa)    
Predicted Functional Partners:
wefN
Glycosyl transferase group 1 WefN.
 
     0.937
BDP_1846
Glycosyl transferase group 1.
 
     0.898
BDP_1849
Glycosyl transferase, family 2.
 
 
 0.813
BDP_1847
Capsular polysaccharide biosynthsis protein.
 
     0.809
BDP_1848
Glycosyl transferase, family 2.
 
 
 0.799
BDP_1853
Acetyltransferase.
  
  
 0.784
BDP_1851
Conserved hypothetical protein.
       0.777
BDP_1854
Chain length regulator (capsular polysaccharide biosynthesis) / Tyrosine-protein kinase.
 
  
 0.772
BDP_1843
Glycosyl transferase family 2.
 
 
 0.718
BDP_1844
Glycosyl transferase, family 2.
 
 
 0.706
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.