Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cspDUndecaprenyl-phosphate galactose phosphotransferase CspD. (88 aa)    
Predicted Functional Partners:
BDP_1854
Chain length regulator (capsular polysaccharide biosynthesis) / Tyrosine-protein kinase.
 
  
 0.994
BDP_1859
Chain length regulator (capsular polysaccharide biosynthesis) / Tyrosine-protein kinase.
 
  
 0.992
wzy
Wzy putative exopolysaccharide polymerization protein.
  
  
 0.923
BDP_2040
Glycosyltransferase.
  
  
 0.893
BDP_0333
Putative guanylyltransferase.
  
  
 0.848
BDP_1817
Conserved hypothetical protein.
 
  
 0.753
wzx
Wzx flippase.
 
  
 0.748
BDP_2037
Conserved hypothetical protein.
 
  
 0.747
mrp
Mrp ATP-binding Mrp-like protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.729
BDP_1829
Hypothetical transmembrane protein possibly involved in polysaccharide biosynthesis.
  
  
 0.715
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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