STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyaBAdenylate cyclase. (204 aa)    
Predicted Functional Partners:
BDP_0904
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
  0.900
relA1
relA1 GTP pyrophosphokinase/Guanosine 3',5'-bis(Diphosphate)3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
  0.900
relA2
relA2 GTP pyrophosphokinase.
     
  0.900
nrdD
nrdD Anaerobic ribonucleoside-triphosphate reductase.
     
  0.900
folE
GTP cyclohydrolase I.
     
  0.800
BDP_1580
Conserved hypothetical protein.
  
     0.753
BDP_0503
Narrowly conserved hypothetical membrane spanning protein.
  
     0.737
BDP_0476
Narrowly conserved hypothetical secreted protein.
  
     0.735
BDP_1937
Conserved hypothetical protein.
  
   
 0.724
BDP_1778
Hypothetical protein.
  
     0.717
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.