STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metAHomoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (344 aa)    
Predicted Functional Partners:
metY
metY O-acetylhomoserine aminocarboxypropyltransferase.
 
 
 0.963
metY-2
MetY O-acetylhomoserine aminocarboxypropyltransferase.
 
 
 0.963
thrA
Homoserine dehydrogenase.
  
 
 0.938
BDP_0671
Cystathionine gamma-synthase.
  
 
 0.936
metB-2
metB Cystathionine gamma-synthase.
  
 
 0.936
trpBC
Indole-3-glycerol phosphate synthase; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpC family.
    
  0.837
cysK
cysK cysteine synthase.
    
 0.832
tdcB
TdcB Threonine dehydratase.
   
 
 0.821
sdaA
L-serine dehydratase.
     
 0.810
serB1
serB1 Phosphoserine phosphatase.
     
  0.800
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.