Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BDP_1987Acetyltransferase (GNAT) family. (357 aa)    
Predicted Functional Partners:
BDP_1986
Conserved hypothetical protein with DUF2469 domain.
       0.822
BDP_0476
Narrowly conserved hypothetical secreted protein.
  
     0.752
BDP_1580
Conserved hypothetical protein.
  
     0.751
BDP_2268
Conserved hypothetical secreted protein.
  
     0.745
BDP_1331
Narrowly conserved hypothetical protein.
  
    0.733
BDP_0356
Conserved hypothetical membrane spanning protein.
  
     0.728
BDP_1208
Hypothetical secreted protein.
  
     0.728
BDP_1589
Chromosome segregation ATPase.
  
    0.719
BDP_0887
Conserved hypothetical protein.
  
     0.718
BDP_0886
Conserved hypothetical protein.
 
     0.712
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.