STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_2016ATP-binding protein of ABC transporter system. (236 aa)    
Predicted Functional Partners:
BDP_2015
Conserved hypothetical protein.
       0.803
BDP_1302
ATP-binding protein of ABC transporter system.
  
     0.727
BDP_0339
ATP-binding protein of ABC transporter system.
  
     0.699
BDP_1059
ABC transporter ATP-binding protein.
  
     0.698
BDP_1015
ABC transporter ATP-binding protein.
  
     0.651
BDP_0841
ATP-binding protein of ABC transporter system.
  
     0.649
BDP_0816
ATP-binding protein of ABC transporter system.
  
     0.609
BDP_1495
ATP-binding protein of ABC transporter system.
  
     0.603
BDP_0709
ATP-binding protein of ABC transporter system.
  
     0.583
vexP2
ATP-binding protein of ABC transporter system VexP2.
  
     0.554
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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