STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BDP_2017Two-component response regulator. (223 aa)    
Predicted Functional Partners:
BDP_1436
Histidine kinase sensor of two-component system.
 
 
 0.842
BDP_0819
Two component system histidine kinase.
 
 
 0.823
BDP_1002
Two-component response regulator.
  
     0.773
BDP_0499
Two-component response regulator.
  
     0.771
BDP_2018
Sensor histidine kinase.
  
 
 0.736
BDP_1003
Two-component sensor histidine kinase.
 
 
 0.639
BDP_0500
Histidine kinase sensor of two component system.
 
 
 0.552
BDP_2015
Conserved hypothetical protein.
       0.415
BDP_2016
ATP-binding protein of ABC transporter system.
       0.415
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.