STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_2030Glycosyl transferase family 2. (292 aa)    
Predicted Functional Partners:
wzx-3
Flippase Wzx.
  
  
 0.546
BDP_2032
Glycosyl transferase group 1.
  
   0.524
BDP_4001
Glycosyl transferase, family 2.
 
     0.498
BDP_2047
ATP-binding protein ABC transporter system for polysaccharides.
 
  
 0.485
BDP_2034
Glycosyl transferase family 2.
 
     0.474
BDP_2048
Permease protein of ABC transporter system for polysaccharides.
 
  
 0.454
BDP_2033
Nucleotide sugar dehydrogenase.
  
  
 0.428
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.