STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nagA1NagA1 N-acetylglucosamine-6-phosphate deacetylase. (373 aa)    
Predicted Functional Partners:
BDP_0650
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
    
 0.938
glmM
GlmM phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
    
 0.937
pgl
Pgl 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.899
BDP_1930
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1(PTS system).
 
   
 0.780
BDP_0890
Conserved hypothetical protein.
 
    0.737
ptsG
ptsG PTS system, glucose-specific IIABC component.
     
 0.703
BDP_2071
N-acetylglucosamine repressor.
 
 
 0.689
nucS
Conserved hypothetical protein with DUF91 domain; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
      0.639
BDP_0498
Hypothetical protein.
 
  
 0.637
glk
Glk Glucokinase/Xylose repressor.
 
  
 0.498
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.