STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_2090Melibiose carrier protein. (518 aa)    
Predicted Functional Partners:
BDP_2089
DNase, TatD family.
       0.776
BDP_2091
Alpha-arabinofuranosidase I.
  
    0.725
BDP_2092
Alpha-galactosidase.
  
    0.719
BDP_0694
Conserved hypothetical protein.
  
     0.714
lacS-2
lacS Galactoside symporter.
  
     0.615
BDP_0157
Symporter.
  
     0.541
BDP_0209
Sugar transporter.
  
     0.500
kup
Kup system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.
       0.466
scrT-2
scrT Sucrose transporter.
  
     0.460
BDP_0010
Hypothetical membrane spanning protein, H+/gluconate symporter.
  
     0.455
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.