STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_2127Cellobiose phosphorylase. (834 aa)    
Predicted Functional Partners:
BDP_2148
Cellulase.
 
  
 0.979
BDP_2147
Endoglucanase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.962
bgl2
Bgl2 Beta-glucosidase.
 
  
 0.932
BDP_0124
Beta-glucosidase.
    
 0.911
bgl
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.911
BDP_0029
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.908
BDP_1029
Pullulanase.
   
 
 0.907
BDP_1678
Glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.907
BDP_1679
Glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.907
BDP_0208
Beta-glucosidase.
    
 0.906
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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