STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
aldHAldH Aldehyde dehydrogenase (NAD(P)+). (450 aa)    
Predicted Functional Partners:
argD-3
ArgD Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.956
sdhA
SdhA Succinate dehydrogenase flavoprotein subunit.
 
 0.936
adh2-2
Adh2 Aldehyde-alcohol dehydrogenase 2.
  
 0.927
sdhB
SdhB Succinate dehydrogenase iron-sulfur protein.
   
 
 0.911
gltA
gltA Citrate synthase; Belongs to the citrate synthase family.
  
 0.873
icdA
icdA Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.855
BDP_2134
ABC transporter permease protein.
  
  
 0.753
BDP_2135
ABC transporter permease.
  
    0.711
BDP_2137
ABC transporter binding protein.
  
  
 0.663
BDP_2136
Binding-protein-dependent transport systems inner membrane component.
  
    0.628
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (20%) [HD]