Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
BDP_2147Endoglucanase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (363 aa)    
Predicted Functional Partners:
BDP_2148
Cellulase.
 
  
 
0.964
BDP_2127
Cellobiose phosphorylase.
 
  
 0.962
BDP_2146
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.813
BDP_0123
Acetyl esterase.
 
 
 0.758
bgl4-2
Bgl4 Beta-glucosidase.
    
 0.728
BDP_0131
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.727
bgl2
Bgl2 Beta-glucosidase.
 
  
 0.722
BDP_0208
Beta-glucosidase.
 
  
 0.697
BDP_0128
Mannosidase.
 
  
 0.690
BDP_0124
Beta-glucosidase.
    
 0.674
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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