Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
BDP_2153Lipolytic protein G-D-S-L family. (240 aa)    
Predicted Functional Partners:
BDP_2152
Alpha-L-fucosidase.
 
     0.881
BDP_2154
Extracellular solute-binding protein, family 1.
 
     0.587
bgl4-2
Bgl4 Beta-glucosidase.
       0.582
BDP_2156
Permease protein of ABC transporter system for sugars.
 
    0.497
BDP_2155
Sugar ABC transporter, permease protein.
 
    0.486
BDP_2092
Alpha-galactosidase.
 
  
 0.466
BDP_2110
Extracellular solute-binding protein, family 1.
  
     0.406
BDP_2148
Cellulase.
   
 
 0.402
aglL
AglL Glycosyl hydrolases family 31, Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
       0.401
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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