STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_2193Hypothetical membrane spanning protein. (266 aa)    
Predicted Functional Partners:
malG
MalG Maltose transport system permease protein.
 
     0.880
BDP_2194
Haloacid dehalogenase-like hydrolase (HAD superfamily).
 
     0.879
apuB
ApuB Amylopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
     0.877
malC
MalC Maltodextrin transport system permease protein.
 
     0.764
BDP_2203
Conserved hypothetical membrane spanning protein.
  
     0.720
malE
MalE Maltose/maltodextrin-binding protein.
 
     0.613
BDP_0110
Hypothetical membrane-spanning protein.
  
     0.599
BDP_2192
Transcriptional regulator, LacI family.
       0.489
BDP_0165
Hypothetical membrane-spanning protein.
  
     0.488
BDP_2157
Conserved hypothetical membrane spanning protein.
  
     0.447
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.