STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
malGMalG Maltose transport system permease protein. (254 aa)    
Predicted Functional Partners:
malE
MalE Maltose/maltodextrin-binding protein.
 
 0.999
malC
MalC Maltodextrin transport system permease protein.
 
 0.996
BDP_2238
ATP-binding protein of ABC transporter system for sugars; Belongs to the ABC transporter superfamily.
 
 0.989
BDP_2161
Solute binding protein of ABC transporter system for sugars.
  
 
 0.907
BDP_2204
Permease protein of ABC transporter system for sugars.
     
 
0.900
apuB
ApuB Amylopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
   
 0.874
BDP_2194
Haloacid dehalogenase-like hydrolase (HAD superfamily).
 
     0.855
BDP_2193
Hypothetical membrane spanning protein.
 
     0.852
agl3
Agl3 Alpha-glucosidase.
 
  
 0.827
malQ1
MalQ1 4-alpha-glucanotransferase.
  
  
 0.780
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.