STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malCMalC Maltodextrin transport system permease protein. (467 aa)    
Predicted Functional Partners:
malG
MalG Maltose transport system permease protein.
 
 0.998
malE
MalE Maltose/maltodextrin-binding protein.
 
 0.992
BDP_2238
ATP-binding protein of ABC transporter system for sugars; Belongs to the ABC transporter superfamily.
 
 0.953
BDP_2204
Permease protein of ABC transporter system for sugars.
  
  0.943
apuB
ApuB Amylopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
     0.798
BDP_2194
Haloacid dehalogenase-like hydrolase (HAD superfamily).
 
    0.771
BDP_2193
Hypothetical membrane spanning protein.
 
     0.764
agl3
Agl3 Alpha-glucosidase.
 
    0.672
BDP_1704
Sugar-binding protein of ABC transporter system, permease.
 
 
 0.611
BDP_2161
Solute binding protein of ABC transporter system for sugars.
  
 
 0.609
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.