Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
BDP_2216Chromate reductase/NADPH-dependent FMN reductase/Oxygen-insensitive NADPH nitroreductase; Belongs to the flavin oxidoreductase frp family. (262 aa)    
Predicted Functional Partners:
ribF
ribF Riboflavin kinase/FMN adenylyltransferase.
    
 0.910
virR-3
VirR Two-component response regulator.
       0.642
virS-2
Two-component sensor kinase VirS.
       0.642
BDP_1439
ABC-type multidrug transport system permease.
  
  
 0.481
BDP_1440
ABC-2 type transporter.
  
  
 0.481
BDP_1710
Lactoylglutathione lyase-like protein.
  
  
 0.469
BDP_2212
Hypothetical protein.
       0.456
bgl5-5
Bgl5 Beta-glucosidase.
       0.456
BDP_1078
Glutamate synthase [NADPH] large subunit.
     
 0.448
BDP_1366
Conserved hypothetical membrane spanning protein.
 
  
 0.431
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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