STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDP_2216Chromate reductase/NADPH-dependent FMN reductase/Oxygen-insensitive NADPH nitroreductase; Belongs to the flavin oxidoreductase frp family. (262 aa)    
Predicted Functional Partners:
virR-3
VirR Two-component response regulator.
       0.642
virS-2
Two-component sensor kinase VirS.
       0.642
BDP_1439
ABC-type multidrug transport system permease.
  
  
 0.490
BDP_1440
ABC-2 type transporter.
  
  
 0.490
BDP_1710
Lactoylglutathione lyase-like protein.
  
  
 0.488
BDP_2212
Hypothetical protein.
       0.456
bgl5-5
Bgl5 Beta-glucosidase.
       0.456
BDP_2208
Phosphoglycerate mutase family protein.
  
    0.431
BDP_2209
Conserved hypothetical protein.
       0.414
BDP_1366
Conserved hypothetical membrane spanning protein.
 
  
 0.400
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.